Engineered Cells

TP53 Knockout in HEK293 Cell Line (Human)

This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]

Guides designed
3
Cuts canonical
Yes
Coding seq. cut
54%–66%
CCDS cut
26 of 26
Earliest exon cut
Exon 5
Off-target genes
None
Molecular function
transcription cis-regulatory region bindingRNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription factor activity, RNA polymerase II-specificcis-regulatory region sequence-specific DNA bindingcore promoter sequence-specific DNA bindingTFIID-class transcription factor complex binding
Biological process
negative regulation of transcription by RNA polymerase IIhematopoietic progenitor cell differentiationnucleotide-excision repairregulation of DNA-templated transcriptionregulation of transcription by RNA polymerase IIautophagy
Cellular component
chromatinnucleusnucleoplasmtranscription regulator complexnucleoluscytoplasm
Homo sapiens (Human)CVCL_0045

Transformed cell line · Female · Fetus · kidney

TP53 DepMap profile

No exact DepMap match for this line, so per-gene dependency/expression isn't available (only ~⅔ of lines are profiled).

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