Engineered Cells

LRRK2 Knockout in A549 Cell Line (Human)

This gene is a member of the leucine-rich repeat kinase family and encodes a protein with an ankryin repeat region, a leucine-rich repeat (LRR) domain, a kinase domain, a DFG-like motif, a RAS domain, a GTPase domain, a MLK-like domain, and a WD40 domain. The protein is present largely in the cytoplasm but also associates with the mitochondrial outer membrane. Mutations in this gene have been associated with Parkinson disease-8. [provided by RefSeq, Jul 2008]

Guides designed
3
Cuts canonical
Yes
Coding seq. cut
98%–100%
CCDS cut
2 of 2
Earliest exon cut
Exon 1
Off-target genes
None
Molecular function
SNARE bindingmagnesium ion bindingactin bindingGTPase activityprotein kinase activityprotein serine/threonine kinase activity
Biological process
MAPK cascadeprotein phosphorylationendocytosisresponse to oxidative stressmitochondrion organizationendoplasmic reticulum organization
Cellular component
Golgi membraneextracellular regioncytoplasmmitochondrionmitochondrial outer membranemitochondrial inner membrane
Homo sapiens (Human)CVCL_0023

Cancer cell line · Male · 58Y · lung

LRRK2 DepMap profileACH-000681

This line vs. all DepMap-profiled lines for LRRK2.

CRISPR gene effectimpact on cell growth
Not essential0.01
-0.700.75
CRISPR dependencyreliance on this gene
Low0.02
0.000.85
Transcriptlog₂(TPM+1)
Cut by guides6
ENST00000298910.12canonicalCCDS2.09
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